Feature/issue 3311 test thread tbb exp#3314
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parallel_for, blocked range compiles for stan::math::exp compiling blocked_range works fine some progress, now a type deduction issue? ok something closer... implement struct version for parallel_for... uncompiled begin new class to use parallel for almost compiles... getting close, have template deduction failed which we can figure out almost compiles hold on compiles remove dead code compiled parallel_for, blocked_range for stan::math::exp compiled parallel_for, blocked_range for stan::math::exp
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Hold on, sorry I should re-base. I have some questions, wondering if anyone had comments or is this all on me? Refactor, and using threads at lower number of observations. |
…rezap/math into feature/issue-3311-test-thread-tbb-exp
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Do you have a graph that shows the speedup? Overall I'd be kind of cautious introducing lower level threading like this. Like you saw, whether you get a speedup or slowdown depends a lot on the number of observations. So for every vector operations we would have to have a check that the size exceeded some threshold. That threshold is going to vary a lot per computer and I think I think if we are not careful could make the codebase kind of funky. The other piece here is that this works for |
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I’m thinking about, haven’t thought too far ahead yet, thank you.
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…On Thu, Apr 30, 2026 at 5:46 PM Steve Bronder ***@***.***> wrote:
*SteveBronder* left a comment (stan-dev/math#3314)
<#3314 (comment)>
Do you have a graph that shows the speedup? Overall I'd be kind of
cautious introducing lower level threading like this. Like you saw, whether
you get a speedup or slowdown depends a lot on the number of observations.
So for every vector operations we would have to have a check that the size
exceeded some threshold. That threshold is going to vary a lot per computer
and I think I think if we are not careful could make the codebase kind of
funky.
The other piece here is that this works for prim functions of double
type, but parallelism is much harder for reverse mode which is the main
piece of the math library we worry about. The main issue is handling how
the global AD tape should sync when we have jobs across N threads.
@andrjohns <https://github.com/andrjohns> thought for a long while trying
to figure out how to do a nice parallel map(...) style function for
reverse mode autodiff. I'm not sure he came up with something he found
satisfying. I have not either honestly. Essentially you need to shard the
operation over N shards which will have N autodiff stacks, then once the
parallel computation is done you have to pass those autodiff stacks back
and put them onto the main thread's stack. So there you would get
performance benefits for setting up the forward pass in parallel, but then
the reverse pass would still be serial and you pay the cost of the sharding
and thread startup. I'm very certain there is a way to do it so you can do
the forward and reverse pass in parallel, but nothing has ever come to me
for this problem.
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I'm doing continuous integration tests, it looks like it's mostly passing now.
And I need to consider threading the rev autodiff stack, that would be cool, if different threads could build different expression trees, I think that's what Steve was saying. But if this adds incremental speed increase, why not? WRT Steves comment I can think about it, but here I'm not parallelizing anything on the stack, just evaluation of the computation of |
Jenkins Console Log Machine informationNo LSB modules are available. Distributor ID: Ubuntu Description: Ubuntu 20.04.3 LTS Release: 20.04 Codename: focalCPU: G++: Clang: |
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Not sure why Jenkins emailed me SUCCESS when there's so many errors? I'm not seeing these locally. I also named the branch wrong, but I'll just leave it until it's closed... |
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I've already benchmarked it and answered several of your questions. I have
an issue open already. Your matrix multiplication benchmarks are in no way
comprehensive about answering whether parallelizing functions will scale.
And nothing I have built for this project, or any project, has ever needed
maintainenance.
If you want to take a look at the "levers in play," you can take a look at
me benchmarking certain parallelization parameters (i.e. #threads, block
size) which will give some insight as to how the different levers perform.
You can run multiple threads on one core.
I am talking specifically about parallelism. So why are you pointing me to
this report?
And sure, if your "levers" are something you'd like to evaluate, please
itemize them.
I've already done some tests to show overhead of initiating threads.
What levers would you like to see pulled?
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…On Thu, May 28, 2026, 2:56 PM Steve Bronder ***@***.***> wrote:
Closed #3314 <#3314>.
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@Steve Bronder ***@***.***> thoughts?
I am not sure why you're talking about not parallelization when this is the
main topic I'm talking about. Does not make sense.
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…On Thu, May 28, 2026, 3:38 PM Andre Zapico ***@***.***> wrote:
I've already benchmarked it and answered several of your questions. I have
an issue open already. Your matrix multiplication benchmarks are in no way
comprehensive about answering whether parallelizing functions will scale.
And nothing I have built for this project, or any project, has ever needed
maintainenance.
If you want to take a look at the "levers in play," you can take a look at
me benchmarking certain parallelization parameters (i.e. #threads, block
size) which will give some insight as to how the different levers perform.
You can run multiple threads on one core.
I am talking specifically about parallelism. So why are you pointing me to
this report?
And sure, if your "levers" are something you'd like to evaluate, please
itemize them.
I've already done some tests to show overhead of initiating threads.
What levers would you like to see pulled?
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
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On Thu, May 28, 2026, 2:56 PM Steve Bronder ***@***.***>
wrote:
> Closed #3314 <#3314>.
>
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Can you point me to them? I am not seeing google benchmarks in this thread.
Can you show me a file in Stan math you wrote that does not later have contributors? Looking at the
I want an actual google benchmark.
What report are you talking about?
A good start would be experiments that check as the size of a vector and number of threads vary how does that affect performance relative to serial execution of the function. You can use the I've directed you several times to the |
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Give me a clear ordered list of what you would like to see.
There has been minimal changes to the GP functions I've written. Yes, I am
aware code requires maintainance.
Go ahead and run .run tests.py test/unit/math/prim/fun/exp_test both with
and without STAN_THREADS=TRUE, in make local and you will see a huge
performance gain, as well as an example of Amdahl's law in practice.
Again, not sure why you are referencing benchmarks that have nothing to do
with parallelization when this is what we are discussing.
Again, I am working on obtaining a functional machine for programming.
Best,
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…On Thu, May 28, 2026, 4:28 PM Steve Bronder ***@***.***> wrote:
*SteveBronder* left a comment (stan-dev/math#3314)
<#3314 (comment)>
I've already benchmarked it and answered several of your questions. I have
an issue open already. Your matrix multiplication benchmarks are in no way
comprehensive about answering whether parallelizing functions will scale.
Can you point me to them? I am not seeing google benchmarks in this thread.
And nothing I have built for this project, or any project, has ever needed
maintainenance.
Can you show me a file in Stan math you wrote that does not later have
contributors? Looking at the git blame for the gp functions they have
been refactored and rewritten over the years. All code adds maintenance.
If you want to take a look at the "levers in play," you can take a look at
me benchmarking certain parallelization parameters (i.e. #threads, block
size) which will give some insight as to how the different levers perform.
I want an actual google benchmark.
You can run multiple threads on one core.
I am talking specifically about parallelism. So why are you pointing me to
this report?
What report are you talking about? stan-perf is a repository with
everything setup so that you can use google benchmark for building
benchmark experiments. I feel like you are not reading or looking at the
resources I am sending you.
And sure, if your "levers" are something you'd like to evaluate, please
itemize them.
I've already done some tests to show overhead of initiating threads.
What levers would you like to see pulled?
A good start would be experiments that check as the size of a vector and
number of threads vary how does that affect performance relative to serial
execution of the function. You can use the stan-perf
<https://github.com/SteveBronder/stan-perf> repository to setup your
benchmarks and execute them. You can fork the stan-perf repository, write
your benchmarks, make some nice graphs, and share your code and results.
I've directed you several times to the stan-perf repository to setup your
benchmarking code. Is there something I'm missing as to why you do not go
and build the benchmarks via that repo and run them? Using
google/benchmark will give you consistent and sharable results. You can
also output the results to csv/json so you can make nice plots in R or
python.
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I'm very confused. Your benchmarks are very ad hoc and Im asking for more formal benchmarks. I feel I'm not being very heard. You can read the stan-perf repo and post clear benchmarks using the Google benchmark suite provided in that repo. |
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Give me list of parameters you'd like to be benchmarked. Keep in mind, when
varied in conjunction this can effect benchmarking results.
Can you provide an enum (an ordered enumerated list) of what you'd like to
see benchmarked, so we're all not wasting time?
Thanks!
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…On Thu, May 28, 2026, 8:51 PM Steve Bronder ***@***.***> wrote:
*SteveBronder* left a comment (stan-dev/math#3314)
<#3314 (comment)>
I'm very confused. Your benchmarks are very ad hoc and Im asking for more
eformal benchmarks. I feel I'm not being very heard. You can read the
stan-perf repo and post clear benchmarks using the Google benchmark suite
provided in that repo.
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I would want vectors from size 2 to 32,768 by powers of 2 (so 2, 4, 8, 16,...). Then I would want threads from 1, 2, 4, ... up to the max threads on your computer. If you use stan-perf google benchmark has the tooling setup for this |
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And what parameters, threads, block size, randomly generated number
datasets, what PDFs?
If you run my tests I've done something similar.
Can you be more rigorous about what you would like?
Thanks!
Best,
Andre Zapico
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…On Fri, May 29, 2026, 2:02 AM Steve Bronder ***@***.***> wrote:
*SteveBronder* left a comment (stan-dev/math#3314)
<#3314 (comment)>
I would want vectors from size 2 to 32,768 by powers of 2 (so 2, 4, 8,
16,...). Then I would want threads from 1, 2, 4, ... up to the max threads
on your computer. If you use stan-perf google benchmark has the tooling
setup for this
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Give me columns and rows of a table you'd like to see and I'll benchmark it.
I.e. #threads,block size,
Rows: datasetsize,
Etc.
See what I'm saying?
Best,
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…On Fri, May 29, 2026, 12:55 PM Andre Zapico ***@***.***> wrote:
And what parameters, threads, block size, randomly generated number
datasets, what PDFs?
If you run my tests I've done something similar.
Can you be more rigorous about what you would like?
Thanks!
Best,
Andre Zapico
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On Fri, May 29, 2026, 2:02 AM Steve Bronder ***@***.***>
wrote:
> *SteveBronder* left a comment (stan-dev/math#3314)
> <#3314 (comment)>
>
> I would want vectors from size 2 to 32,768 by powers of 2 (so 2, 4, 8,
> 16,...). Then I would want threads from 1, 2, 4, ... up to the max threads
> on your computer. If you use stan-perf google benchmark has the tooling
> setup for this
>
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I really don't see what you are saying here. Again if you look at the example benchmarks in the stan-perf repo it should be reasonable to fork the repo and copy the current benchmarks into a new folder to run them so that you can run the benchmarks over the serial and parallel exponential function. Your code only changes prim so you only need to use doubles |
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I feel like you are not listening to what I have said here or read the stan-perf repo. At this point it feels like we are talking in circles. If you have specific issues with getting the Stan perf repo running ping me but otherwise I have nothing more to add here |
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What exactly would you like to see evaluated? Be precise.
I feel you're being intentionally vague.
Which levers do you need pulled?
Probably the optimization surface is multimodal but we can use some convex
optimization via CVXpy or something to find a local max that could
definitely improve performance and could be hidden from users so there's
not questions as to how to run something.
Give me a table to fill out with benchmarks.
Clear, or no?
Best,
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…On Fri, May 29, 2026, 1:54 PM Steve Bronder ***@***.***> wrote:
*SteveBronder* left a comment (stan-dev/math#3314)
<#3314 (comment)>
I really don't see what you are saying here. Again if you look at the
example benchmarks in the stan-perf repo it should be reasonable to fork
the repo and copy the current benchmarks into a new folder to run them so
that you can run the benchmarks over the serial and parallel exponential
function. Your code only changes prim so you only need to use doubles
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You are way overthinking this. I want you to use the Google benchmark library to benchmark only the exponential function for the dimensions and threads I specified above. Nothing else. The stan-perf repo has what you need. |
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I don't think you're being specific enough. You've clearly negated things I
have shown and adding additional boundaries to contributing.
Best,
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…On Fri, May 29, 2026, 2:27 PM Steve Bronder ***@***.***> wrote:
*SteveBronder* left a comment (stan-dev/math#3314)
<#3314 (comment)>
You are way overthinking this. I want you to use the Google benchmark
library to benchmark *only* the exponential function for the dimensions
and threads I specified above. Nothing else. The stan-perf repo has what
you need.
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I am sorry for incorrect grammar, ignoring** things that I have shown.
You clearly haven't investigated my benchmarks or given any clear feedback
as to what "levers" you'd like to pull.
I'm offering my time for free to improve the performance of the math
library.
Best,
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…On Fri, May 29, 2026, 2:33 PM Andre Zapico ***@***.***> wrote:
I don't think you're being specific enough. You've clearly negated things
I have shown and adding additional boundaries to contributing.
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On Fri, May 29, 2026, 2:27 PM Steve Bronder ***@***.***>
wrote:
> *SteveBronder* left a comment (stan-dev/math#3314)
> <#3314 (comment)>
>
> You are way overthinking this. I want you to use the Google benchmark
> library to benchmark *only* the exponential function for the dimensions
> and threads I specified above. Nothing else. The stan-perf repo has what
> you need.
>
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And you think principled benchmarks are overthinking?
Best,
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BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Fri, May 29, 2026, 2:35 PM Andre Zapico ***@***.***> wrote:
I am sorry for incorrect grammar, ignoring** things that I have shown.
You clearly haven't investigated my benchmarks or given any clear feedback
as to what "levers" you'd like to pull.
I'm offering my time for free to improve the performance of the math
library.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
On Fri, May 29, 2026, 2:33 PM Andre Zapico ***@***.***> wrote:
> I don't think you're being specific enough. You've clearly negated things
> I have shown and adding additional boundaries to contributing.
>
> Best,
>
>
> Andre Zapico
> linkedin.com/in/andre-zapico
> gitub.com/drezap
>
>
> ME Information and Communication Engineering
> University of Electronic Science and Technology of China
>
> Consultant, Owner
> likely llc
> likelyllc.com
>
> Stan Developer
> mc-stan.org
>
> BS Mathematical Sciences: Probabilistic Methods
> BS Statistics
> University of Michigan, Ann Arbor 2017
>
> On Fri, May 29, 2026, 2:27 PM Steve Bronder ***@***.***>
> wrote:
>
>> *SteveBronder* left a comment (stan-dev/math#3314)
>> <#3314 (comment)>
>>
>> You are way overthinking this. I want you to use the Google benchmark
>> library to benchmark *only* the exponential function for the dimensions
>> and threads I specified above. Nothing else. The stan-perf repo has what
>> you need.
>>
>> —
>> Reply to this email directly, view it on GitHub
>> <#3314?email_source=notifications&email_token=ACY543DQDPSVP6SKD4IGYID45HI7ZA5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJXHA2TKMZSGI3KM4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4578553226>,
>> or unsubscribe
>> <https://github.com/notifications/unsubscribe-auth/ACY543HDGOBEQK5R3ND6QB345HI7ZAVCNFSM6AAAAACYLKOWDKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHM2DKNZYGU2TGMRSGY>
>> .
>> You are receiving this because you were mentioned.Message ID:
>> ***@***.***>
>>
>
|
Yes absolutely. I want you to use the Google benchmark library to do a microbenchmark of only the exponential function for the dimensions and threads I specified above. Nothing else. The stan-perf repo has what you need. |
|
You did not explicitly specify. Please specify in the following response.
Give me an "enum," or an ordered list. With this, we can come up with at
least a proxy that will give performance gains for users, that can be
extracted away from them so they're not confused about the male/local
directory.
Thank you.
I have already exhibited Ahmdal's Law. Moreover, we're not investing
whether threads travel through composite functions, etc.
I'm up to incorporate stan-perf into Stan/math benchmarks pipeline. I've
done some YAML.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Fri, May 29, 2026, 3:19 PM Steve Bronder ***@***.***> wrote:
*SteveBronder* left a comment (stan-dev/math#3314)
<#3314 (comment)>
And you think principled benchmarks are overthinking?
Yes absolutely. I want you to use the Google benchmark library to do a
microbenchmark of only the exponential function for the dimensions and
threads I specified above. Nothing else. The stan-perf repo has what you
need.
—
Reply to this email directly, view it on GitHub
<#3314?email_source=notifications&email_token=ACY543BV3B2QLKITRF2F5B345HPC5A5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJXHEYDCNBYGM42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4579014839>,
or unsubscribe
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.
You are receiving this because you were mentioned.Message ID:
***@***.***>
|
|
@wds15, Sebastian, I forget your handle.
Thoughts? What columns/covariates would you like to see identified before
this moves further? Always up to cancel a useless project, but this could
add major gains and it's passing all unit tests.
Two commits before was the fastest. I can be more clear/specific with
benchmarks. I should be back on a computer Tomorrow.
I was looking at #threads, block size, and also fixing and scaling N. also
not sure how this will behave with composite functions (every single PDF).
ignoring auto diff for now, but just function evaluation threaded could
potentially reduce execution time.
The tests pass for rev/mix/prim on the fastest implementation, and i'm
using declaratives but if there was a serious merge there could be another
directory like the openCL GPU stuff. I'm around watching this I'd maintain
it. I think it's like 7:30 Berlin time right now.
Thoughts on more rigorous evaluation?
And then doing something more fancy threading rev would be sweet, but I
don't like to spend time on projects that are not thoroughly evaluatee
whether they are possible or not.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Fri, May 29, 2026, 7:46 PM Andre Zapico ***@***.***> wrote:
You did not explicitly specify. Please specify in the following response.
Give me an "enum," or an ordered list. With this, we can come up with at
least a proxy that will give performance gains for users, that can be
extracted away from them so they're not confused about the male/local
directory.
Thank you.
I have already exhibited Ahmdal's Law. Moreover, we're not investing
whether threads travel through composite functions, etc.
I'm up to incorporate stan-perf into Stan/math benchmarks pipeline. I've
done some YAML.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
On Fri, May 29, 2026, 3:19 PM Steve Bronder ***@***.***>
wrote:
> *SteveBronder* left a comment (stan-dev/math#3314)
> <#3314 (comment)>
>
> And you think principled benchmarks are overthinking?
>
> Yes absolutely. I want you to use the Google benchmark library to do a
> microbenchmark of only the exponential function for the dimensions and
> threads I specified above. Nothing else. The stan-perf repo has what you
> need.
>
> —
> Reply to this email directly, view it on GitHub
> <#3314?email_source=notifications&email_token=ACY543BV3B2QLKITRF2F5B345HPC5A5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJXHEYDCNBYGM42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4579014839>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/ACY543A3C4JYQLWMYU4AE7345HPC5AVCNFSM6AAAAACYLKOWDKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHM2DKNZZGAYTIOBTHE>
> .
> You are receiving this because you were mentioned.Message ID:
> ***@***.***>
>
|
|
Alright hold on. new PC. I am just doing basic stuff browsing files. I have
12 cores and I'm using about 2500 threads. Literally nothing but OS updates
and browsing. Still can't get into GitHub. But clearly the OS devs are
threading under the hood and masking it from users.
Let me come up with a concrete list of what's happening and see if you like
it. I think Steve had some good insight as to what's good to test? Again
this is like one 5 line class. Easy to maintain and I won't disappear.
Before just: fix dataset size, vary #threads, block size, (something to
else),
And then I scaled dataset size, fixing block size and varied threads. So
there's this combinatorially increasing # of plots, which is why I didn't
feel like plotting it.
Once GitHub lets me back in, want me to give you a laundry list?
And the I'm open to more people with operating system (OS) dev experience
chiming in.
But I think capitalizing on this could potentially add gains. And not
really much maintenance, I could get prim/rev/mix tests on Travis to pass
over night. We just have to worry about stupid stuff like extra copies etc.
Deleting unused stuff (on the stack?) after we exit the function. Not sure
if C++ has an automatic garbage cleaner like python? You guys would know.
In C sometimes people were deleting memory and sometimes not there was not
a concrete rule.
Thoughts? I think Breve Stonder would have more insight as what to test.
Again, happy to run benchmarks and then may be add stan-perf to the
pipeline.
But also I am thinking whether threads travel through composite functions?
Simple stuff like that.
Then I could worry about rev mode.
Sound silly or no? IDK I am math background. Open to any feedback.
And I still can't get into GitHub I am bothering their team. But yeah
GitHub what's going on?
Cheers everyone.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Sat, May 30, 2026, 1:21 AM Andre Zapico ***@***.***> wrote:
@wds15, Sebastian, I forget your handle.
Thoughts? What columns/covariates would you like to see identified before
this moves further? Always up to cancel a useless project, but this could
add major gains and it's passing all unit tests.
Two commits before was the fastest. I can be more clear/specific with
benchmarks. I should be back on a computer Tomorrow.
I was looking at #threads, block size, and also fixing and scaling N. also
not sure how this will behave with composite functions (every single PDF).
ignoring auto diff for now, but just function evaluation threaded could
potentially reduce execution time.
The tests pass for rev/mix/prim on the fastest implementation, and i'm
using declaratives but if there was a serious merge there could be another
directory like the openCL GPU stuff. I'm around watching this I'd maintain
it. I think it's like 7:30 Berlin time right now.
Thoughts on more rigorous evaluation?
And then doing something more fancy threading rev would be sweet, but I
don't like to spend time on projects that are not thoroughly evaluatee
whether they are possible or not.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
On Fri, May 29, 2026, 7:46 PM Andre Zapico ***@***.***> wrote:
> You did not explicitly specify. Please specify in the following response.
> Give me an "enum," or an ordered list. With this, we can come up with at
> least a proxy that will give performance gains for users, that can be
> extracted away from them so they're not confused about the male/local
> directory.
>
> Thank you.
>
> I have already exhibited Ahmdal's Law. Moreover, we're not investing
> whether threads travel through composite functions, etc.
>
> I'm up to incorporate stan-perf into Stan/math benchmarks pipeline. I've
> done some YAML.
>
> Best,
>
>
> Andre Zapico
> linkedin.com/in/andre-zapico
> gitub.com/drezap
>
>
> ME Information and Communication Engineering
> University of Electronic Science and Technology of China
>
> Consultant, Owner
> likely llc
> likelyllc.com
>
> Stan Developer
> mc-stan.org
>
> BS Mathematical Sciences: Probabilistic Methods
> BS Statistics
> University of Michigan, Ann Arbor 2017
>
> On Fri, May 29, 2026, 3:19 PM Steve Bronder ***@***.***>
> wrote:
>
>> *SteveBronder* left a comment (stan-dev/math#3314)
>> <#3314 (comment)>
>>
>> And you think principled benchmarks are overthinking?
>>
>> Yes absolutely. I want you to use the Google benchmark library to do a
>> microbenchmark of only the exponential function for the dimensions and
>> threads I specified above. Nothing else. The stan-perf repo has what you
>> need.
>>
>> —
>> Reply to this email directly, view it on GitHub
>> <#3314?email_source=notifications&email_token=ACY543BV3B2QLKITRF2F5B345HPC5A5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJXHEYDCNBYGM42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4579014839>,
>> or unsubscribe
>> <https://github.com/notifications/unsubscribe-auth/ACY543A3C4JYQLWMYU4AE7345HPC5AVCNFSM6AAAAACYLKOWDKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHM2DKNZZGAYTIOBTHE>
>> .
>> You are receiving this because you were mentioned.Message ID:
>> ***@***.***>
>>
>
>
>
|
|
http://github.com/aditii010
Tagging ***@***.***
Curious to hear your thoughts? I have a math background not an OS
background.
Steve doesn't seem interested in threading but all OS' do this and abstract
from the user.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Sun, May 31, 2026, 12:16 AM Andre Zapico ***@***.***> wrote:
Alright hold on. new PC. I am just doing basic stuff browsing files. I
have 12 cores and I'm using about 2500 threads. Literally nothing but OS
updates and browsing. Still can't get into GitHub. But clearly the OS devs
are threading under the hood and masking it from users.
Let me come up with a concrete list of what's happening and see if you
like it. I think Steve had some good insight as to what's good to test?
Again this is like one 5 line class. Easy to maintain and I won't disappear.
Before just: fix dataset size, vary #threads, block size, (something to
else),
And then I scaled dataset size, fixing block size and varied threads. So
there's this combinatorially increasing # of plots, which is why I didn't
feel like plotting it.
Once GitHub lets me back in, want me to give you a laundry list?
And the I'm open to more people with operating system (OS) dev experience
chiming in.
But I think capitalizing on this could potentially add gains. And not
really much maintenance, I could get prim/rev/mix tests on Travis to pass
over night. We just have to worry about stupid stuff like extra copies etc.
Deleting unused stuff (on the stack?) after we exit the function. Not sure
if C++ has an automatic garbage cleaner like python? You guys would know.
In C sometimes people were deleting memory and sometimes not there was not
a concrete rule.
Thoughts? I think Breve Stonder would have more insight as what to test.
Again, happy to run benchmarks and then may be add stan-perf to the
pipeline.
But also I am thinking whether threads travel through composite functions?
Simple stuff like that.
Then I could worry about rev mode.
Sound silly or no? IDK I am math background. Open to any feedback.
And I still can't get into GitHub I am bothering their team. But yeah
GitHub what's going on?
Cheers everyone.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
On Sat, May 30, 2026, 1:21 AM Andre Zapico ***@***.***> wrote:
> @wds15, Sebastian, I forget your handle.
>
> Thoughts? What columns/covariates would you like to see identified before
> this moves further? Always up to cancel a useless project, but this could
> add major gains and it's passing all unit tests.
>
> Two commits before was the fastest. I can be more clear/specific with
> benchmarks. I should be back on a computer Tomorrow.
>
> I was looking at #threads, block size, and also fixing and scaling N.
> also not sure how this will behave with composite functions (every single
> PDF). ignoring auto diff for now, but just function evaluation threaded
> could potentially reduce execution time.
>
> The tests pass for rev/mix/prim on the fastest implementation, and i'm
> using declaratives but if there was a serious merge there could be another
> directory like the openCL GPU stuff. I'm around watching this I'd maintain
> it. I think it's like 7:30 Berlin time right now.
>
> Thoughts on more rigorous evaluation?
>
> And then doing something more fancy threading rev would be sweet, but I
> don't like to spend time on projects that are not thoroughly evaluatee
> whether they are possible or not.
>
>
>
> Best,
>
>
> Andre Zapico
> linkedin.com/in/andre-zapico
> gitub.com/drezap
>
>
> ME Information and Communication Engineering
> University of Electronic Science and Technology of China
>
> Consultant, Owner
> likely llc
> likelyllc.com
>
> Stan Developer
> mc-stan.org
>
> BS Mathematical Sciences: Probabilistic Methods
> BS Statistics
> University of Michigan, Ann Arbor 2017
>
> On Fri, May 29, 2026, 7:46 PM Andre Zapico ***@***.***> wrote:
>
>> You did not explicitly specify. Please specify in the following
>> response. Give me an "enum," or an ordered list. With this, we can come up
>> with at least a proxy that will give performance gains for users, that can
>> be extracted away from them so they're not confused about the male/local
>> directory.
>>
>> Thank you.
>>
>> I have already exhibited Ahmdal's Law. Moreover, we're not investing
>> whether threads travel through composite functions, etc.
>>
>> I'm up to incorporate stan-perf into Stan/math benchmarks pipeline. I've
>> done some YAML.
>>
>> Best,
>>
>>
>> Andre Zapico
>> linkedin.com/in/andre-zapico
>> gitub.com/drezap
>>
>>
>> ME Information and Communication Engineering
>> University of Electronic Science and Technology of China
>>
>> Consultant, Owner
>> likely llc
>> likelyllc.com
>>
>> Stan Developer
>> mc-stan.org
>>
>> BS Mathematical Sciences: Probabilistic Methods
>> BS Statistics
>> University of Michigan, Ann Arbor 2017
>>
>> On Fri, May 29, 2026, 3:19 PM Steve Bronder ***@***.***>
>> wrote:
>>
>>> *SteveBronder* left a comment (stan-dev/math#3314)
>>> <#3314 (comment)>
>>>
>>> And you think principled benchmarks are overthinking?
>>>
>>> Yes absolutely. I want you to use the Google benchmark library to do a
>>> microbenchmark of only the exponential function for the dimensions and
>>> threads I specified above. Nothing else. The stan-perf repo has what you
>>> need.
>>>
>>> —
>>> Reply to this email directly, view it on GitHub
>>> <#3314?email_source=notifications&email_token=ACY543BV3B2QLKITRF2F5B345HPC5A5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJXHEYDCNBYGM42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4579014839>,
>>> or unsubscribe
>>> <https://github.com/notifications/unsubscribe-auth/ACY543A3C4JYQLWMYU4AE7345HPC5AVCNFSM6AAAAACYLKOWDKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHM2DKNZZGAYTIOBTHE>
>>> .
>>> You are receiving this because you were mentioned.Message ID:
>>> ***@***.***>
>>>
>>
>>
>>
|
|
Did you get the tag? I can't tell, verification issues.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…---------- Forwarded message ---------
From: Aditi Sikarwar ***@***.***>
Date: Sun, May 31, 2026, 9:41 AM
Subject: Re: Quant Computing OSS
To: Andre Zapico ***@***.***>
Hey Andre,
Yes, definitely interested !
My background is mostly on the GPU/HPC side - CUDA C++, parallel kernel
design, memory hierarchy optimisation. I've worked on things like this so
the performance engineering side of this is right in my lane even if my
Stan internals knowledge is still developing
GitHub: github.com/aditii010
Happy to look at the thread once you're tagged in.
Aditi
On Sun, 31 May 2026 at 10:10, Andre Zapico ***@***.***> wrote:
Hey,
Are you interested in quant/stat computing?
I have a math background so I am less familiar but still love C++/C and
programming.
If so, pass me your GitHub handle and I'll tag you in a thread.
The Stan math library uses auto diff to compute gradients for arbitrary
probabilistic/statistical models but I'm thinking doing some basic
concurrency could add huge speed ups (since in iterative algorithms
operations are repeated thousands of times, i.e. every PDF uses an
exponential).
What do you think/what's your GitHub handle?
(I am still trying to get access laptop was stolen 🤣).
Cheers.
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
|
|
I blocked on my personal github because I feel like I've tried discussing this with you and it is taking away from time I would like to spend helping other pull requests and issues get resolved. I've said several times that I'm against this level of automatic parallelization because it will be a lot of maintenance but you keep dismissing my requests without addressing them. I'm going to not reply on this anymore as I just don't know how to continue the discussion in a fruitful way. |
|
Whatever feelings don't matter in software dev.
***@***.***
Aditi did you take a look at this? Looking for someone to work with with
more expertise in OS dev. Theory is important but concurrency clearly
widely used.
This project could clearly capitalize on this more.
Cheers all,
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Mon, Jun 1, 2026, 1:45 PM Steve Bronder ***@***.***> wrote:
*SteveBronder* left a comment (stan-dev/math#3314)
<#3314 (comment)>
I blocked because I feel like I've tried discussing this with you and it
is taking away from time I would like to spend helping other pull requests
and issues get resolved.
I've said several times that I'm against this level of automatic
parallelization because it will be a lot of maintenance but you keep
dismissing my requests without addressing them. I'm going to not reply on
this anymore as I just don't know how to continue the discussion in a
fruitful way.
—
Reply to this email directly, view it on GitHub
<#3314?email_source=notifications&email_token=ACY543COJERYESC7EJXDBMT45W6NPA5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJZGUYDOMJXHA42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4595071789>,
or unsubscribe
<https://github.com/notifications/unsubscribe-auth/ACY543FNOWFWAU7P6PJLPAT45W6NPAVCNFSM6AAAAACYLKOWDKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHM2DKOJVGA3TCNZYHE>
.
You are receiving this because you were mentioned.Message ID:
***@***.***>
|
|
I've said several times that I'm against this level of automatic
parallelization because it will be a lot of maintenance but you keep
dismissing my requests without addressing them. I'm going to not reply on
this anymore as I just don't know how to continue the discussion in a
fruitful way.
— ok Steve give me an ordered list of what you'd like me to address. You
still have not clearly addressed these things.
Give me like an enum. And yes, I maintaint software and provide reliable
analyses.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Mon, Jun 1, 2026, 7:34 PM Andre Zapico ***@***.***> wrote:
Whatever feelings don't matter in software dev.
***@***.***
Aditi did you take a look at this? Looking for someone to work with with
more expertise in OS dev. Theory is important but concurrency clearly
widely used.
This project could clearly capitalize on this more.
Cheers all,
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
On Mon, Jun 1, 2026, 1:45 PM Steve Bronder ***@***.***>
wrote:
> *SteveBronder* left a comment (stan-dev/math#3314)
> <#3314 (comment)>
>
> I blocked because I feel like I've tried discussing this with you and it
> is taking away from time I would like to spend helping other pull requests
> and issues get resolved.
>
> I've said several times that I'm against this level of automatic
> parallelization because it will be a lot of maintenance but you keep
> dismissing my requests without addressing them. I'm going to not reply on
> this anymore as I just don't know how to continue the discussion in a
> fruitful way.
>
> —
> Reply to this email directly, view it on GitHub
> <#3314?email_source=notifications&email_token=ACY543COJERYESC7EJXDBMT45W6NPA5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJZGUYDOMJXHA42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4595071789>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/ACY543FNOWFWAU7P6PJLPAT45W6NPAVCNFSM6AAAAACYLKOWDKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHM2DKOJVGA3TCNZYHE>
> .
> You are receiving this because you were mentioned.Message ID:
> ***@***.***>
>
|
|
Steve, please list your requests.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Mon, Jun 1, 2026, 7:36 PM Andre Zapico ***@***.***> wrote:
I've said several times that I'm against this level of automatic
parallelization because it will be a lot of maintenance but you keep
dismissing my requests without addressing them. I'm going to not reply on
this anymore as I just don't know how to continue the discussion in a
fruitful way.
— ok Steve give me an ordered list of what you'd like me to address. You
still have not clearly addressed these things.
Give me like an enum. And yes, I maintaint software and provide reliable
analyses.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
On Mon, Jun 1, 2026, 7:34 PM Andre Zapico ***@***.***> wrote:
> Whatever feelings don't matter in software dev.
> ***@***.***
>
> Aditi did you take a look at this? Looking for someone to work with with
> more expertise in OS dev. Theory is important but concurrency clearly
> widely used.
>
> This project could clearly capitalize on this more.
>
>
> Cheers all,
>
> Best,
>
>
> Andre Zapico
> linkedin.com/in/andre-zapico
> gitub.com/drezap
>
>
> ME Information and Communication Engineering
> University of Electronic Science and Technology of China
>
> Consultant, Owner
> likely llc
> likelyllc.com
>
> Stan Developer
> mc-stan.org
>
> BS Mathematical Sciences: Probabilistic Methods
> BS Statistics
> University of Michigan, Ann Arbor 2017
>
> On Mon, Jun 1, 2026, 1:45 PM Steve Bronder ***@***.***>
> wrote:
>
>> *SteveBronder* left a comment (stan-dev/math#3314)
>> <#3314 (comment)>
>>
>> I blocked because I feel like I've tried discussing this with you and it
>> is taking away from time I would like to spend helping other pull requests
>> and issues get resolved.
>>
>> I've said several times that I'm against this level of automatic
>> parallelization because it will be a lot of maintenance but you keep
>> dismissing my requests without addressing them. I'm going to not reply on
>> this anymore as I just don't know how to continue the discussion in a
>> fruitful way.
>>
>> —
>> Reply to this email directly, view it on GitHub
>> <#3314?email_source=notifications&email_token=ACY543COJERYESC7EJXDBMT45W6NPA5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJZGUYDOMJXHA42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4595071789>,
>> or unsubscribe
>> <https://github.com/notifications/unsubscribe-auth/ACY543FNOWFWAU7P6PJLPAT45W6NPAVCNFSM6AAAAACYLKOWDKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHM2DKOJVGA3TCNZYHE>
>> .
>> You are receiving this because you were mentioned.Message ID:
>> ***@***.***>
>>
>
>
>
|
|
Steve, updates? You are paid to work on this project and have not
explicitly listed your requirements.
Please advise.
Kind regards.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Mon, Jun 1, 2026, 7:40 PM Andre Zapico ***@***.***> wrote:
Steve, please list your requests.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
On Mon, Jun 1, 2026, 7:36 PM Andre Zapico ***@***.***> wrote:
> I've said several times that I'm against this level of automatic
> parallelization because it will be a lot of maintenance but you keep
> dismissing my requests without addressing them. I'm going to not reply on
> this anymore as I just don't know how to continue the discussion in a
> fruitful way.
>
> — ok Steve give me an ordered list of what you'd like me to address. You
> still have not clearly addressed these things.
>
> Give me like an enum. And yes, I maintaint software and provide reliable
> analyses.
>
>
> Best,
>
>
> Andre Zapico
> linkedin.com/in/andre-zapico
> gitub.com/drezap
>
>
> ME Information and Communication Engineering
> University of Electronic Science and Technology of China
>
> Consultant, Owner
> likely llc
> likelyllc.com
>
> Stan Developer
> mc-stan.org
>
> BS Mathematical Sciences: Probabilistic Methods
> BS Statistics
> University of Michigan, Ann Arbor 2017
>
> On Mon, Jun 1, 2026, 7:34 PM Andre Zapico ***@***.***> wrote:
>
>> Whatever feelings don't matter in software dev.
>> ***@***.***
>>
>> Aditi did you take a look at this? Looking for someone to work with with
>> more expertise in OS dev. Theory is important but concurrency clearly
>> widely used.
>>
>> This project could clearly capitalize on this more.
>>
>>
>> Cheers all,
>>
>> Best,
>>
>>
>> Andre Zapico
>> linkedin.com/in/andre-zapico
>> gitub.com/drezap
>>
>>
>> ME Information and Communication Engineering
>> University of Electronic Science and Technology of China
>>
>> Consultant, Owner
>> likely llc
>> likelyllc.com
>>
>> Stan Developer
>> mc-stan.org
>>
>> BS Mathematical Sciences: Probabilistic Methods
>> BS Statistics
>> University of Michigan, Ann Arbor 2017
>>
>> On Mon, Jun 1, 2026, 1:45 PM Steve Bronder ***@***.***>
>> wrote:
>>
>>> *SteveBronder* left a comment (stan-dev/math#3314)
>>> <#3314 (comment)>
>>>
>>> I blocked because I feel like I've tried discussing this with you and
>>> it is taking away from time I would like to spend helping other pull
>>> requests and issues get resolved.
>>>
>>> I've said several times that I'm against this level of automatic
>>> parallelization because it will be a lot of maintenance but you keep
>>> dismissing my requests without addressing them. I'm going to not reply on
>>> this anymore as I just don't know how to continue the discussion in a
>>> fruitful way.
>>>
>>> —
>>> Reply to this email directly, view it on GitHub
>>> <#3314?email_source=notifications&email_token=ACY543COJERYESC7EJXDBMT45W6NPA5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJZGUYDOMJXHA42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4595071789>,
>>> or unsubscribe
>>> <https://github.com/notifications/unsubscribe-auth/ACY543FNOWFWAU7P6PJLPAT45W6NPAVCNFSM6AAAAACYLKOWDKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHM2DKOJVGA3TCNZYHE>
>>> .
>>> You are receiving this because you were mentioned.Message ID:
>>> ***@***.***>
>>>
>>
>>
>>
>
>
|
|
It's about working hours ET us. Mind giving me a list of what you need
benchmarked?
You have refused to do so, and ignorey previous benchmarks.
You are getting paid for this.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Tue, Jun 2, 2026, 7:15 AM Andre Zapico ***@***.***> wrote:
Steve, updates? You are paid to work on this project and have not
explicitly listed your requirements.
Please advise.
Kind regards.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
On Mon, Jun 1, 2026, 7:40 PM Andre Zapico ***@***.***> wrote:
> Steve, please list your requests.
>
> Best,
>
>
> Andre Zapico
> linkedin.com/in/andre-zapico
> gitub.com/drezap
>
>
> ME Information and Communication Engineering
> University of Electronic Science and Technology of China
>
> Consultant, Owner
> likely llc
> likelyllc.com
>
> Stan Developer
> mc-stan.org
>
> BS Mathematical Sciences: Probabilistic Methods
> BS Statistics
> University of Michigan, Ann Arbor 2017
>
> On Mon, Jun 1, 2026, 7:36 PM Andre Zapico ***@***.***> wrote:
>
>> I've said several times that I'm against this level of automatic
>> parallelization because it will be a lot of maintenance but you keep
>> dismissing my requests without addressing them. I'm going to not reply on
>> this anymore as I just don't know how to continue the discussion in a
>> fruitful way.
>>
>> — ok Steve give me an ordered list of what you'd like me to address. You
>> still have not clearly addressed these things.
>>
>> Give me like an enum. And yes, I maintaint software and provide reliable
>> analyses.
>>
>>
>> Best,
>>
>>
>> Andre Zapico
>> linkedin.com/in/andre-zapico
>> gitub.com/drezap
>>
>>
>> ME Information and Communication Engineering
>> University of Electronic Science and Technology of China
>>
>> Consultant, Owner
>> likely llc
>> likelyllc.com
>>
>> Stan Developer
>> mc-stan.org
>>
>> BS Mathematical Sciences: Probabilistic Methods
>> BS Statistics
>> University of Michigan, Ann Arbor 2017
>>
>> On Mon, Jun 1, 2026, 7:34 PM Andre Zapico ***@***.***> wrote:
>>
>>> Whatever feelings don't matter in software dev.
>>> ***@***.***
>>>
>>> Aditi did you take a look at this? Looking for someone to work with
>>> with more expertise in OS dev. Theory is important but concurrency clearly
>>> widely used.
>>>
>>> This project could clearly capitalize on this more.
>>>
>>>
>>> Cheers all,
>>>
>>> Best,
>>>
>>>
>>> Andre Zapico
>>> linkedin.com/in/andre-zapico
>>> gitub.com/drezap
>>>
>>>
>>> ME Information and Communication Engineering
>>> University of Electronic Science and Technology of China
>>>
>>> Consultant, Owner
>>> likely llc
>>> likelyllc.com
>>>
>>> Stan Developer
>>> mc-stan.org
>>>
>>> BS Mathematical Sciences: Probabilistic Methods
>>> BS Statistics
>>> University of Michigan, Ann Arbor 2017
>>>
>>> On Mon, Jun 1, 2026, 1:45 PM Steve Bronder ***@***.***>
>>> wrote:
>>>
>>>> *SteveBronder* left a comment (stan-dev/math#3314)
>>>> <#3314 (comment)>
>>>>
>>>> I blocked because I feel like I've tried discussing this with you and
>>>> it is taking away from time I would like to spend helping other pull
>>>> requests and issues get resolved.
>>>>
>>>> I've said several times that I'm against this level of automatic
>>>> parallelization because it will be a lot of maintenance but you keep
>>>> dismissing my requests without addressing them. I'm going to not reply on
>>>> this anymore as I just don't know how to continue the discussion in a
>>>> fruitful way.
>>>>
>>>> —
>>>> Reply to this email directly, view it on GitHub
>>>> <#3314?email_source=notifications&email_token=ACY543COJERYESC7EJXDBMT45W6NPA5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJZGUYDOMJXHA42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4595071789>,
>>>> or unsubscribe
>>>> <https://github.com/notifications/unsubscribe-auth/ACY543FNOWFWAU7P6PJLPAT45W6NPAVCNFSM6AAAAACYLKOWDKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHM2DKOJVGA3TCNZYHE>
>>>> .
>>>> You are receiving this because you were mentioned.Message ID:
>>>> ***@***.***>
>>>>
>>>
>>>
>>>
>>
>>
|
|
Any updates? These are working hours. Thanks all.
Steve has not provided objective for what he needs.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Tue, Jun 2, 2026, 8:49 AM Andre Zapico ***@***.***> wrote:
It's about working hours ET us. Mind giving me a list of what you need
benchmarked?
You have refused to do so, and ignorey previous benchmarks.
You are getting paid for this.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
On Tue, Jun 2, 2026, 7:15 AM Andre Zapico ***@***.***> wrote:
> Steve, updates? You are paid to work on this project and have not
> explicitly listed your requirements.
>
> Please advise.
>
> Kind regards.
>
> Best,
>
>
> Andre Zapico
> linkedin.com/in/andre-zapico
> gitub.com/drezap
>
>
> ME Information and Communication Engineering
> University of Electronic Science and Technology of China
>
> Consultant, Owner
> likely llc
> likelyllc.com
>
> Stan Developer
> mc-stan.org
>
> BS Mathematical Sciences: Probabilistic Methods
> BS Statistics
> University of Michigan, Ann Arbor 2017
>
> On Mon, Jun 1, 2026, 7:40 PM Andre Zapico ***@***.***> wrote:
>
>> Steve, please list your requests.
>>
>> Best,
>>
>>
>> Andre Zapico
>> linkedin.com/in/andre-zapico
>> gitub.com/drezap
>>
>>
>> ME Information and Communication Engineering
>> University of Electronic Science and Technology of China
>>
>> Consultant, Owner
>> likely llc
>> likelyllc.com
>>
>> Stan Developer
>> mc-stan.org
>>
>> BS Mathematical Sciences: Probabilistic Methods
>> BS Statistics
>> University of Michigan, Ann Arbor 2017
>>
>> On Mon, Jun 1, 2026, 7:36 PM Andre Zapico ***@***.***> wrote:
>>
>>> I've said several times that I'm against this level of automatic
>>> parallelization because it will be a lot of maintenance but you keep
>>> dismissing my requests without addressing them. I'm going to not reply on
>>> this anymore as I just don't know how to continue the discussion in a
>>> fruitful way.
>>>
>>> — ok Steve give me an ordered list of what you'd like me to address.
>>> You still have not clearly addressed these things.
>>>
>>> Give me like an enum. And yes, I maintaint software and provide
>>> reliable analyses.
>>>
>>>
>>> Best,
>>>
>>>
>>> Andre Zapico
>>> linkedin.com/in/andre-zapico
>>> gitub.com/drezap
>>>
>>>
>>> ME Information and Communication Engineering
>>> University of Electronic Science and Technology of China
>>>
>>> Consultant, Owner
>>> likely llc
>>> likelyllc.com
>>>
>>> Stan Developer
>>> mc-stan.org
>>>
>>> BS Mathematical Sciences: Probabilistic Methods
>>> BS Statistics
>>> University of Michigan, Ann Arbor 2017
>>>
>>> On Mon, Jun 1, 2026, 7:34 PM Andre Zapico ***@***.***>
>>> wrote:
>>>
>>>> Whatever feelings don't matter in software dev.
>>>> ***@***.***
>>>>
>>>> Aditi did you take a look at this? Looking for someone to work with
>>>> with more expertise in OS dev. Theory is important but concurrency clearly
>>>> widely used.
>>>>
>>>> This project could clearly capitalize on this more.
>>>>
>>>>
>>>> Cheers all,
>>>>
>>>> Best,
>>>>
>>>>
>>>> Andre Zapico
>>>> linkedin.com/in/andre-zapico
>>>> gitub.com/drezap
>>>>
>>>>
>>>> ME Information and Communication Engineering
>>>> University of Electronic Science and Technology of China
>>>>
>>>> Consultant, Owner
>>>> likely llc
>>>> likelyllc.com
>>>>
>>>> Stan Developer
>>>> mc-stan.org
>>>>
>>>> BS Mathematical Sciences: Probabilistic Methods
>>>> BS Statistics
>>>> University of Michigan, Ann Arbor 2017
>>>>
>>>> On Mon, Jun 1, 2026, 1:45 PM Steve Bronder ***@***.***>
>>>> wrote:
>>>>
>>>>> *SteveBronder* left a comment (stan-dev/math#3314)
>>>>> <#3314 (comment)>
>>>>>
>>>>> I blocked because I feel like I've tried discussing this with you and
>>>>> it is taking away from time I would like to spend helping other pull
>>>>> requests and issues get resolved.
>>>>>
>>>>> I've said several times that I'm against this level of automatic
>>>>> parallelization because it will be a lot of maintenance but you keep
>>>>> dismissing my requests without addressing them. I'm going to not reply on
>>>>> this anymore as I just don't know how to continue the discussion in a
>>>>> fruitful way.
>>>>>
>>>>> —
>>>>> Reply to this email directly, view it on GitHub
>>>>> <#3314?email_source=notifications&email_token=ACY543COJERYESC7EJXDBMT45W6NPA5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJZGUYDOMJXHA42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4595071789>,
>>>>> or unsubscribe
>>>>> <https://github.com/notifications/unsubscribe-auth/ACY543FNOWFWAU7P6PJLPAT45W6NPAVCNFSM6AAAAACYLKOWDKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHM2DKOJVGA3TCNZYHE>
>>>>> .
>>>>> You are receiving this because you were mentioned.Message ID:
>>>>> ***@***.***>
>>>>>
>>>>
>>>>
>>>>
>>>
>>>
|
|
Still waiting @Steve Bronder ***@***.***>
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
…On Tue, Jun 2, 2026, 2:40 PM Andre Zapico ***@***.***> wrote:
Any updates? These are working hours. Thanks all.
Steve has not provided objective for what he needs.
Best,
Andre Zapico
linkedin.com/in/andre-zapico
gitub.com/drezap
ME Information and Communication Engineering
University of Electronic Science and Technology of China
Consultant, Owner
likely llc
likelyllc.com
Stan Developer
mc-stan.org
BS Mathematical Sciences: Probabilistic Methods
BS Statistics
University of Michigan, Ann Arbor 2017
On Tue, Jun 2, 2026, 8:49 AM Andre Zapico ***@***.***> wrote:
> It's about working hours ET us. Mind giving me a list of what you need
> benchmarked?
>
> You have refused to do so, and ignorey previous benchmarks.
>
> You are getting paid for this.
>
> Best,
>
>
> Andre Zapico
> linkedin.com/in/andre-zapico
> gitub.com/drezap
>
>
> ME Information and Communication Engineering
> University of Electronic Science and Technology of China
>
> Consultant, Owner
> likely llc
> likelyllc.com
>
> Stan Developer
> mc-stan.org
>
> BS Mathematical Sciences: Probabilistic Methods
> BS Statistics
> University of Michigan, Ann Arbor 2017
>
> On Tue, Jun 2, 2026, 7:15 AM Andre Zapico ***@***.***> wrote:
>
>> Steve, updates? You are paid to work on this project and have not
>> explicitly listed your requirements.
>>
>> Please advise.
>>
>> Kind regards.
>>
>> Best,
>>
>>
>> Andre Zapico
>> linkedin.com/in/andre-zapico
>> gitub.com/drezap
>>
>>
>> ME Information and Communication Engineering
>> University of Electronic Science and Technology of China
>>
>> Consultant, Owner
>> likely llc
>> likelyllc.com
>>
>> Stan Developer
>> mc-stan.org
>>
>> BS Mathematical Sciences: Probabilistic Methods
>> BS Statistics
>> University of Michigan, Ann Arbor 2017
>>
>> On Mon, Jun 1, 2026, 7:40 PM Andre Zapico ***@***.***> wrote:
>>
>>> Steve, please list your requests.
>>>
>>> Best,
>>>
>>>
>>> Andre Zapico
>>> linkedin.com/in/andre-zapico
>>> gitub.com/drezap
>>>
>>>
>>> ME Information and Communication Engineering
>>> University of Electronic Science and Technology of China
>>>
>>> Consultant, Owner
>>> likely llc
>>> likelyllc.com
>>>
>>> Stan Developer
>>> mc-stan.org
>>>
>>> BS Mathematical Sciences: Probabilistic Methods
>>> BS Statistics
>>> University of Michigan, Ann Arbor 2017
>>>
>>> On Mon, Jun 1, 2026, 7:36 PM Andre Zapico ***@***.***>
>>> wrote:
>>>
>>>> I've said several times that I'm against this level of automatic
>>>> parallelization because it will be a lot of maintenance but you keep
>>>> dismissing my requests without addressing them. I'm going to not reply on
>>>> this anymore as I just don't know how to continue the discussion in a
>>>> fruitful way.
>>>>
>>>> — ok Steve give me an ordered list of what you'd like me to address.
>>>> You still have not clearly addressed these things.
>>>>
>>>> Give me like an enum. And yes, I maintaint software and provide
>>>> reliable analyses.
>>>>
>>>>
>>>> Best,
>>>>
>>>>
>>>> Andre Zapico
>>>> linkedin.com/in/andre-zapico
>>>> gitub.com/drezap
>>>>
>>>>
>>>> ME Information and Communication Engineering
>>>> University of Electronic Science and Technology of China
>>>>
>>>> Consultant, Owner
>>>> likely llc
>>>> likelyllc.com
>>>>
>>>> Stan Developer
>>>> mc-stan.org
>>>>
>>>> BS Mathematical Sciences: Probabilistic Methods
>>>> BS Statistics
>>>> University of Michigan, Ann Arbor 2017
>>>>
>>>> On Mon, Jun 1, 2026, 7:34 PM Andre Zapico ***@***.***>
>>>> wrote:
>>>>
>>>>> Whatever feelings don't matter in software dev.
>>>>> ***@***.***
>>>>>
>>>>> Aditi did you take a look at this? Looking for someone to work with
>>>>> with more expertise in OS dev. Theory is important but concurrency clearly
>>>>> widely used.
>>>>>
>>>>> This project could clearly capitalize on this more.
>>>>>
>>>>>
>>>>> Cheers all,
>>>>>
>>>>> Best,
>>>>>
>>>>>
>>>>> Andre Zapico
>>>>> linkedin.com/in/andre-zapico
>>>>> gitub.com/drezap
>>>>>
>>>>>
>>>>> ME Information and Communication Engineering
>>>>> University of Electronic Science and Technology of China
>>>>>
>>>>> Consultant, Owner
>>>>> likely llc
>>>>> likelyllc.com
>>>>>
>>>>> Stan Developer
>>>>> mc-stan.org
>>>>>
>>>>> BS Mathematical Sciences: Probabilistic Methods
>>>>> BS Statistics
>>>>> University of Michigan, Ann Arbor 2017
>>>>>
>>>>> On Mon, Jun 1, 2026, 1:45 PM Steve Bronder ***@***.***>
>>>>> wrote:
>>>>>
>>>>>> *SteveBronder* left a comment (stan-dev/math#3314)
>>>>>> <#3314 (comment)>
>>>>>>
>>>>>> I blocked because I feel like I've tried discussing this with you
>>>>>> and it is taking away from time I would like to spend helping other pull
>>>>>> requests and issues get resolved.
>>>>>>
>>>>>> I've said several times that I'm against this level of automatic
>>>>>> parallelization because it will be a lot of maintenance but you keep
>>>>>> dismissing my requests without addressing them. I'm going to not reply on
>>>>>> this anymore as I just don't know how to continue the discussion in a
>>>>>> fruitful way.
>>>>>>
>>>>>> —
>>>>>> Reply to this email directly, view it on GitHub
>>>>>> <#3314?email_source=notifications&email_token=ACY543COJERYESC7EJXDBMT45W6NPA5CNFSNUABFM5UWIORPF5TWS5BNNB2WEL2JONZXKZKDN5WW2ZLOOQXTINJZGUYDOMJXHA42M4TFMFZW63VHNVSW45DJN5XKKZLWMVXHJLDGN5XXIZLSL5RWY2LDNM#issuecomment-4595071789>,
>>>>>> or unsubscribe
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Summary
I wrote a class that contains an
operatorfor exp, which allows use to usetbbfor parallelization of a for loop. It looks like at lower number of observations, the parallelization is marginal, but at higher number of observations the parallelism of the for loop, usingtbb::parallel_for, for example, at ~=32,000 there seems to be a speed up at 4 threads that sustains as we increase the size of theContainer.Tests
I tested for numerical accuracy, which checks out. Moreover, I did the following performance tests:
Side Effects
Yes. If we kick in threads too early, there's actually a slow down in computing
expon a vector with a lower number of observations. May be it would be good if there was a default min threads, or have them kick in only when dataset is a certain size. Moreover, this is just one function, so the result may be different when we have a composite function (Gaussian). I think this may be advantageous at lower number observations, but have not evaluated this.What I've done is added a directive that runs the multithreaded code for only vector, and calls the original code (but it's copy pasted into the STAN_THREADS section) accordingly if the function is not threaded for
exp. I'd be open to a quick re-factor if we wanted to set it up like openCL, and have athreadsdirectory understan\math\prim.Release notes
?
Checklist
Copyright holder: (Andre Zapico, Likely LLC, 2026)
The copyright holder is typically you or your assignee, such as a university or company. By submitting this pull request, the copyright holder is agreeing to the license the submitted work under the following licenses:
- Code: BSD 3-clause (https://opensource.org/licenses/BSD-3-Clause)
- Documentation: CC-BY 4.0 (https://creativecommons.org/licenses/by/4.0/)
the basic tests are passing
./runTests.py test/unit)make test-headers)make test-math-dependencies)make doxygen)make cpplint)the code is written in idiomatic C++ and changes are documented in the doxygen
the new changes are tested